Apr 14, 2020

ELIXIR Norway hosts analysis workflows for SARS-CoV-2 sequence data

In the writing moment 414 complete SARS-CoV-2 genome sequences are accessible in NCBI and many more are being sequenced world-wide. In addition, the sequence data is being made publicly available.

ELIXIR Norway has made available SARS-CoV-2 analysis workflows in Galaxy for both pre-processing of raw Illumina data and for variant analysis of SARS-CoV-2 sequence reads against a complete reference genome. The workflows are available at the NeLS Galaxy instance hosted at NTNU.

The following workflows are now available:

For help or questions regarding the analysis workflows, please contact the national ELIXIR helpdesk: